CDS

Accession Number TCMCG007C07236
gbkey CDS
Protein Id XP_033130675.1
Location join(10717590..10717931,10718002..10718184,10718254..10718322,10718411..10718517,10718605..10718683,10718790..10718963,10719131..10719279,10719369..10719464,10719562..10719664,10719754..10719816,10719898..10719959,10720062..10720158,10720242..10720360,10720443..10720485,10720552..10720653,10720745..10720837,10720933..10721040,10721110..10721396,10721505..10721520)
Gene LOC103869833
GeneID 103869833
Organism Brassica rapa

Protein

Length 763aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033274784.1
Definition DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description Helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13181        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGGGGCCTTCTTCTACGATGCAGACAGCGACGACGAGCTCGAGTTCCTCAACCACGAACTAAACAGTAGCGGGGAAGACAAAGCAGAAGAACGTAAAGGTCAAGCAGAAGCTGAAGAAGACGAAGATGAGAAGCCTAGAGGAGGTAAAAGAAGCACTAACGCACATTCTCCGTGGGACTTCACATCTTATTCAAGCTCCGTCGGGGAAGAACACGCCCGCCGTCACACAACCTCTATCGATGAGAAGATCTCCAAAGCTATCAAGCATCGTCCGCTTCCCATCTCCACAGAGGAAGAAGATGAAGAAGATGTCTCCGATGCCCAACACGGCAAACAAGAGGAGGAGGAGTATCTCTCGGAAGACGAAGACACAGCTGAGCTCAAAGCAGAAGCCAAGCCGTTTTTCTCAACTGTGGATGGAGTTTCGTTTCATGCTGATTCGTTCATAAAGCTCAATCTCCCTCGTCCGTTGATTCAAGCTTGTAAAACTCTTGGATACGAGAAACCTACACCTATTCAGGCAGCGTGTATCCCTTTAGCAATGCTGGGGCGTGATCTTTGTGCCAGTGCCATCACTGGATCAGGGAAGACTGCTACATTCGCTTTACCTACTCTTGAGAGGTTGATGTACCGTCCCAAGCGGGTATCTGCTACTAGAGCTCTTATTCTCACTCCAACCAGGGAGTTGGCTGTCCAGATTCACAGTATGATTCAGAAGCTTGCACAGTATACTGATATCAAATGTGGATTGATTGTAGGAGGGCTTTCTGTGAGGGAGCAAGAGGTTGTTCTGAGGTCAATGCCAGATATTGTTGTGGCGACTCCTGGACGTATGATAGATCATTTGCGCAATTCTATGTCTGTGGATTTGGATGATCTTTCGGTTTTAATTCTCGATGAAGCAGATCGCCTCCTACAGACTGGGTTTGCCACTGAAATACAAGAGCTGGTTCGCTTATCTCCCAAGAGGAGGCAAACAATGCTCTTCTCAGCGACAATGACTGACGAGGTTAAAGAGCTGGCCAAACTCTCATTGAACAAACCGTTGCGTCTCTCAGCGGATCCATCAGCTAGAAGGCCTCCAGGCCTGACTGAGGAGGTGGTGAGAATACGCAGGACGCGTGAGGCAAATCAGGAAGCCGTTCTTCTTTCATTATGCACAAGAACTTTTAAATCAAAAGTCATCATCTTTAGTGGAACAAAACAGGCTGCACATAGACTGAAAATTTTATTCGGACTCGCTGGCCTCAAAGCAGCTGAGCTTCACGGAAACCTAACTCAAGCACAACGTCTTGATTCTTTGGAACATTTCAGAAAGCAAGAGGTTGATTTTCTCATTGCTACTGATGTGGCTGCTCGAGGGCTTGACATTATTGGTGTCCAAACAGTTATAAATTATGCATGTCCTCGGGAAATAGACAGTTATGTACACAGAGTTGGTAGAACAGCTAGGGCTGGGAGGAAAGGTTATGCAGTAACGTTTGTGACTGACAATGACCGATCACTTTTGAAAGTCATTGCAAAGAAGGTGGGTTCAAAGTTAAAGAGCAGAATCATTCCAGAGCAGTCAATAGTCAAGTGGTCTCAGATAATCGATGAAATGGAAGATCAATACTCGGCTGTTATTCGAGAAGAGAGGGAAGAGAGAGCTCTAAGGAAAGCCGAAATGGAATTTGCAAAGGCGGAGAACATGATTGAGCATAGAGATGAAATATATGCACGGCCAAAAAGGACTTGGTTCATGACAGAGAAGGAGAAGAAGCTCGTGGCCAAAGCTGAGAAGGATTCTGCACGGAACCCTTCTGGAAAGGAACTAATTAGTGCTGATATAGCGGAGGACCTCAAGATGAAGGAGAAGAGAAAACTCGAACGCGAGAAGAATCTCCCGAGGAAAAAACGTAGAAAGCTTGAAGCTGCCAGAGAGATGCTAGAGGATAACGAAGGAGAAGAAGATGGTGAAGACCAAAAACGAGGAAGAACAAGAGGGATGGAAAAGAAGAAGAAGCAAGAACCGGATAAGAAAGGACTGACACTAGTGGATCTTGGTTACCGGCGAGCAAAGGCTGTAAAAGCAAAACAGCGAGCAATTGATTCTGGTAAGATGGATAGACCAACGCCGAACAAGAAACAAAACCTAAACCGAAGTGAACCAAAAACACAGCTTAGAAATGAAGAGATGAAAGATATGTTCAAGAGTGATATGAGCGACAAGAAACAAGGCACAGCAAAACCTAAGGGGAAGTCGAAGAACTCTTTCAAGAGCAAAGGGCGATATAAACGTAGGTAA
Protein:  
MSGAFFYDADSDDELEFLNHELNSSGEDKAEERKGQAEAEEDEDEKPRGGKRSTNAHSPWDFTSYSSSVGEEHARRHTTSIDEKISKAIKHRPLPISTEEEDEEDVSDAQHGKQEEEEYLSEDEDTAELKAEAKPFFSTVDGVSFHADSFIKLNLPRPLIQACKTLGYEKPTPIQAACIPLAMLGRDLCASAITGSGKTATFALPTLERLMYRPKRVSATRALILTPTRELAVQIHSMIQKLAQYTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLQTGFATEIQELVRLSPKRRQTMLFSATMTDEVKELAKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLEHFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGRKGYAVTFVTDNDRSLLKVIAKKVGSKLKSRIIPEQSIVKWSQIIDEMEDQYSAVIREEREERALRKAEMEFAKAENMIEHRDEIYARPKRTWFMTEKEKKLVAKAEKDSARNPSGKELISADIAEDLKMKEKRKLEREKNLPRKKRRKLEAAREMLEDNEGEEDGEDQKRGRTRGMEKKKKQEPDKKGLTLVDLGYRRAKAVKAKQRAIDSGKMDRPTPNKKQNLNRSEPKTQLRNEEMKDMFKSDMSDKKQGTAKPKGKSKNSFKSKGRYKRR